PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G243500.6.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 324aa    MW: 36323.9 Da    PI: 4.439
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G243500.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.4e-05204247755
                         HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +r RR ri ++++ LrellP +     +    a ++  ++++Ik Lq
  Prupe.8G243500.6.p 204 VTDRTRRMRIAERLDALRELLPIS-----TEGGQAFVVDDVIDHIKFLQ 247
                         678*******************97.....34445666666666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.614197246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-8203254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-5204253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.24E-5207251No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MEGQSSLTDP MQLVPLDFCG DAAIDVSQAT GDDPSQQVIM AAEGTAYQTD DLFSPWWTEK  60
PKPSLDSLNY VEFQAESSTF LPKDRSEDIL ESIPLSVSGI DDVGGVSEFQ REVLYSSLRN  120
ACGSKLTDFS MDMDEWKVRC LRPVNDELVN AQHQLHAKYH TSRTDNLCGD KKDSVSQVDP  180
RARSALPDFH SQPHCHISTQ RAAVTDRTRR MRIAERLDAL RELLPISTEG GQAFVVDDVI  240
DHIKFLQLQI KDLCRSRLGG ETITEPIIFR EGYGHYFCHQ NMLNEPLEEM MGKLLETNPM  300
AASQLLENKD LLLLPMDYSE PLA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008355451.11e-127PREDICTED: transcription factor bHLH7-like
RefseqXP_008368858.11e-127PREDICTED: transcription factor bHLH7
RefseqXP_008368859.11e-127PREDICTED: transcription factor bHLH7
TrEMBLW9QKQ97e-89W9QKQ9_9R
STRINGVIT_07s0104g00250.t011e-76(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.14e-18LJRHL1-like 1